Pseudomonas putida S16, PPS_1927

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1927
Name
Replicon chromosome
Genomic location 2157004 - 2157672 (+ strand)

Cross-References

RefSeq YP_004701376.1
GI 339486848
Entrez 10937579
INSDC AEJ12496.1
NCBI Locus Tag PPS_1927
UniParc UPI000217370C
UniProtKB Acc F8FYQ7
UniProtKB ID F8FYQ7_PSEP6
UniRef100 UniRef100_A0A099MYW4
UniRef50 UniRef50_Q0VPT5
UniRef90 UniRef90_I7C3Y9

Product

Feature Type CDS
Coding Frame 1
Product Name
two component winged helix family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.35
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 24.7
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002900 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1927

Human Homologs

References

No references are associated with this feature.