Pseudomonas putida S16, PPS_2005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2005
Name
Replicon chromosome
Genomic location 2243575 - 2244915 (- strand)

Cross-References

RefSeq YP_004701450.1
GI 339486922
Entrez 10937653
INSDC AEJ12570.1
NCBI Locus Tag PPS_2005
UniParc UPI0002173938
UniProtKB Acc F8G031
UniProtKB ID F8G031_PSEP6
UniRef100 UniRef100_F8G031
UniRef50 UniRef50_T2H9Q9
UniRef90 UniRef90_T2H9Q9

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) 0.13
Kyte-Doolittle Hydrophobicity Value -0.511
Molecular Weight (kDa) 48.7
Isoelectric Point (pI) 7.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022986 (72 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2005

Human Homologs

References

No references are associated with this feature.