Pseudomonas putida S16, PPS_2125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2125
Name
Replicon chromosome
Genomic location 2389180 - 2390085 (+ strand)

Cross-References

RefSeq YP_004701566.1
GI 339487038
Entrez 10937769
INSDC AEJ12686.1
NCBI Locus Tag PPS_2125
UniParc UPI0002173D69
UniProtKB Acc F8G1J2
UniProtKB ID F8G1J2_PSEP6
UniRef100 UniRef100_A0A099MXD2
UniRef50 UniRef50_Q4K6E1
UniRef90 UniRef90_Q88JS4

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.65
Kyte-Doolittle Hydrophobicity Value 0.003
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 537 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000217 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2125

Human Homologs

References

No references are associated with this feature.