Pseudomonas putida S16, PPS_2836

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2836
Name
Replicon chromosome
Genomic location 3153504 - 3154079 (+ strand)

Cross-References

RefSeq YP_004702267.1
GI 339487739
Entrez 10938470
INSDC AEJ13387.1
NCBI Locus Tag PPS_2836
UniParc UPI0002173FB9
UniProtKB Acc F8FXM3
UniProtKB ID F8FXM3_PSEP6
UniRef100 UniRef100_F8FXM3
UniRef50 UniRef50_B5E876
UniRef90 UniRef90_S3NQT8

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.48
Kyte-Doolittle Hydrophobicity Value -0.625
Molecular Weight (kDa) 21762.8
Isoelectric Point (pI) 8.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2836

Human Homologs

References

No references are associated with this feature.