Pseudomonas putida S16, PPS_2838

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2838
Name
Replicon chromosome
Genomic location 3155623 - 3156105 (+ strand)

Cross-References

RefSeq YP_004702269.1
GI 339487741
Entrez 10938472
INSDC AEJ13389.1
NCBI Locus Tag PPS_2838
UniParc UPI0002173FBB
UniProtKB Acc F8FXM5
UniProtKB ID F8FXM5_PSEP6
UniRef100 UniRef100_A0A099N2C5
UniRef50 UniRef50_A0A099N2C5
UniRef90 UniRef90_A0A099N2C5

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system lysozyme-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.44
Kyte-Doolittle Hydrophobicity Value -0.434
Molecular Weight (kDa) 18.4
Isoelectric Point (pI) 8.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 52 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016081 (40 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2838

Human Homologs

References

No references are associated with this feature.