Pseudomonas putida S16, PPS_2839

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2839
Name
Replicon chromosome
Genomic location 3156105 - 3157925 (+ strand)

Cross-References

RefSeq YP_004702270.1
GI 339487742
Entrez 10938473
INSDC AEJ13390.1
NCBI Locus Tag PPS_2839
UniParc UPI0002173FBC
UniProtKB Acc F8FXM6
UniProtKB ID F8FXM6_PSEP6
UniRef100 UniRef100_A0A099MZU5
UniRef50 UniRef50_S3N3W2
UniRef90 UniRef90_Q88IA2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.12
Kyte-Doolittle Hydrophobicity Value -0.191
Molecular Weight (kDa) 69.1
Isoelectric Point (pI) 7.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 105 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1252 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2839

Human Homologs

References

No references are associated with this feature.