Pseudomonas putida S16, PPS_2849

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2849
Name
Replicon chromosome
Genomic location 3172330 - 3173427 (+ strand)

Cross-References

RefSeq YP_004702280.1
GI 339487752
Entrez 10938483
INSDC AEJ13400.1
NCBI Locus Tag PPS_2849
UniParc UPI00021740A4
UniProtKB Acc F8FXN6
UniProtKB ID F8FXN6_PSEP6
UniRef100 UniRef100_A0A099MZV3
UniRef50 UniRef50_S3N3W9
UniRef90 UniRef90_B0KU08

Product

Feature Type CDS
Coding Frame 1
Product Name
ImpA family type VI secretion-associated protein
Synonyms
Evidence for Translation
Charge (pH 7) -20.04
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 40.1
Isoelectric Point (pI) 4.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000081 (1178 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2849

Human Homologs

References

No references are associated with this feature.