Pseudomonas putida S16, PPS_3179

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3179
Name
Replicon	chromosome
Genomic location	3572368 - 3573303 (- strand)

Cross-References

RefSeq	YP_004702606.1
GI	339488078
Entrez	10938809
INSDC	AEJ13726.1
NCBI Locus Tag	PPS_3179
UniParc	UPI0002173968
UniProtKB Acc	F8G321
UniProtKB ID	F8G321_PSEP6
UniRef100	UniRef100_M1MF02
UniRef50	UniRef50_P07773
UniRef90	UniRef90_M1MF02

Product

Feature Type	CDS
Coding Frame	1
Product Name	catechol 1,2-dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.92
Kyte-Doolittle Hydrophobicity Value	-0.362
Molecular Weight (kDa)	34.1
Isoelectric Point (pI)	5.37

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
2AZQ	OXIDOREDUCTASE	09/12/05	Crystal Structure of Catechol 1,2-Dioxygenase from Pseudomonas arvilla C-1	Pseudomonas putida	2.65	X-RAY DIFFRACTION	92.6

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 116 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003053 (467 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3179 Search term: catechol 1,2-dioxygenase

Human Homologs

References