Pseudomonas putida S16, PPS_3180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3180
Name
Replicon chromosome
Genomic location 3573347 - 3573637 (- strand)

Cross-References

RefSeq YP_004702607.1
GI 339488079
Entrez 10938810
INSDC AEJ13727.1
NCBI Locus Tag PPS_3180
UniParc UPI0002173969
UniProtKB Acc F8G322
UniProtKB ID F8G322_PSEP6
UniRef100 UniRef100_A0A099N2T5
UniRef50 UniRef50_P00948
UniRef90 UniRef90_P00948

Product

Feature Type CDS
Coding Frame 1
Product Name
muconolactone delta-isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -0.60
Kyte-Doolittle Hydrophobicity Value -0.378
Molecular Weight (kDa) 11.2
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1MLI INTRAMOLECULAR OXIDOREDUCTASE 11/02/89 CRYSTAL STRUCTURE OF MUCONOLACTONE ISOMERASE AT 3.3 ANGSTROMS RESOLUTION Pseudomonas putida 3.3 X-RAY DIFFRACTION 97.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003052 (465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3180

Human Homologs

References

No references are associated with this feature.