Pseudomonas putida S16, PPS_3212

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3212
Name
Replicon chromosome
Genomic location 3616828 - 3617592 (- strand)

Cross-References

RefSeq YP_004702639.1
GI 339488111
Entrez 10938842
INSDC AEJ13759.1
NCBI Locus Tag PPS_3212
UniParc UPI0002173A6D
UniProtKB Acc F8G354
UniProtKB ID F8G354_PSEP6
UniRef100 UniRef100_F8G354
UniRef50 UniRef50_Q4KEF6
UniRef90 UniRef90_Q88GH9

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding transcriptional regulator GlcC
Synonyms
Evidence for Translation
Charge (pH 7) 4.59
Kyte-Doolittle Hydrophobicity Value -0.425
Molecular Weight (kDa) 28578.2
Isoelectric Point (pI) 8.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 372 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003745 (1397 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3212

Human Homologs

References

No references are associated with this feature.