Pseudomonas putida S16, PPS_3221

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3221
Name
Replicon chromosome
Genomic location 3627615 - 3628073 (- strand)

Cross-References

RefSeq YP_004702648.1
GI 339488120
Entrez 10938851
INSDC AEJ13768.1
NCBI Locus Tag PPS_3221
UniParc UPI0002173A76
UniProtKB Acc F8G425
UniProtKB ID F8G425_PSEP6
UniRef100 UniRef100_F8G425
UniRef50 UniRef50_B0VB32
UniRef90 UniRef90_F8G425

Product

Feature Type CDS
Coding Frame 1
Product Name
deaminase
Synonyms
Evidence for Translation
Charge (pH 7) -0.90
Kyte-Doolittle Hydrophobicity Value -0.310
Molecular Weight (kDa) 16.6
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003059 (376 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3221
Search term: deaminase

Human Homologs

Ensembl 97, assembly GRCh38.p12
adenosine deaminase tRNA specific 2 [Source:HGNC Symbol;Acc:HGNC:21172]
E-value: 2.6e-08
Percent Identity: 30.2

References

No references are associated with this feature.