Pseudomonas putida S16, PPS_3224

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3224
Name
Replicon chromosome
Genomic location 3629956 - 3631140 (+ strand)

Cross-References

RefSeq YP_004702651.1
GI 339488123
Entrez 10938854
INSDC AEJ13771.1
NCBI Locus Tag PPS_3224
UniParc UPI0002173A79
UniProtKB Acc F8G428
UniProtKB ID F8G428_PSEP6
UniRef100 UniRef100_F8G428
UniRef50 UniRef50_Q0KBP1
UniRef90 UniRef90_B1J7J6

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-ketothiolase
Synonyms
Evidence for Translation
Charge (pH 7) -1.19
Kyte-Doolittle Hydrophobicity Value 0.108
Molecular Weight (kDa) 40.9
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016485 (101 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3224
Search term: beta-ketothiolase

Human Homologs

Ensembl 97, assembly GRCh38.p12
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 4.7e-94
Percent Identity: 45.6
Ensembl 97, assembly GRCh38.p12
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 4.7e-94
Percent Identity: 45.6

References

No references are associated with this feature.