Pseudomonas putida S16, PPS_3225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_3225
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3631154 - 3632002 (+ strand) |
Cross-References
| RefSeq | YP_004702652.1 |
| GI | 339488124 |
| Entrez | 10938855 |
| INSDC | AEJ13772.1 |
| NCBI Locus Tag | PPS_3225 |
| UniParc | UPI0002173A7A |
| UniProtKB Acc | F8G429 |
| UniProtKB ID | F8G429_PSEP6 |
| UniRef100 | UniRef100_A0A099N2Z8 |
| UniRef50 | UniRef50_A9ATI7 |
| UniRef90 | UniRef90_Q1I8R8 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-hydroxybutyryl-CoA dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.37 |
| Kyte-Doolittle Hydrophobicity Value | 0.199 |
| Molecular Weight (kDa) | 30.1 |
| Isoelectric Point (pI) | 5.77 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG013951 (79 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_3225
Search term: 3-hydroxybutyryl-CoA dehydrogenase
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]
E-value:
1.2e-50
Percent Identity:
38.7
|
References
No references are associated with this feature.