Pseudomonas putida S16, PPS_3225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3225
Name
Replicon chromosome
Genomic location 3631154 - 3632002 (+ strand)

Cross-References

RefSeq YP_004702652.1
GI 339488124
Entrez 10938855
INSDC AEJ13772.1
NCBI Locus Tag PPS_3225
UniParc UPI0002173A7A
UniProtKB Acc F8G429
UniProtKB ID F8G429_PSEP6
UniRef100 UniRef100_A0A099N2Z8
UniRef50 UniRef50_A9ATI7
UniRef90 UniRef90_Q1I8R8

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxybutyryl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.37
Kyte-Doolittle Hydrophobicity Value 0.199
Molecular Weight (kDa) 30.1
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013951 (75 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3225

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]
E-value: 1.2e-50
Percent Identity: 38.7

References

No references are associated with this feature.