Pseudomonas putida S16, PPS_3235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3235
Name
Replicon chromosome
Genomic location 3642444 - 3642752 (+ strand)

Cross-References

RefSeq YP_004702662.1
GI 339488134
Entrez 10938865
NCBI Locus Tag PPS_3235

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator, MvaT P16 subunit
Synonyms
Evidence for Translation
Charge (pH 7) 9.47
Kyte-Doolittle Hydrophobicity Value -0.643
Molecular Weight (kDa) 11517.3
Isoelectric Point (pI) 10.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5B52 TRANSCRIPTION 04/21/16 Crystal structure of the N-terminal domain of H-NS family protein TurB PSEUDOMONAS PUTIDA (STRAIN KT2440) 2.3 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG023539 (14 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3235

Human Homologs

References

No references are associated with this feature.