Pseudomonas putida S16, PPS_3235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_3235
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3642444 - 3642752 (+ strand) |
Cross-References
| RefSeq | YP_004702662.1 |
| GI | 339488134 |
| Entrez | 10938865 |
| NCBI Locus Tag | PPS_3235 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transcriptional regulator, MvaT P16 subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 9.47 |
| Kyte-Doolittle Hydrophobicity Value | -0.643 |
| Molecular Weight (kDa) | 11517.3 |
| Isoelectric Point (pI) | 10.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5B52 | TRANSCRIPTION | 04/21/16 | Crystal structure of the N-terminal domain of H-NS family protein TurB | Pseudomonas putida (strain KT2440) | 2.3 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG023539 (14 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_3235
Search term: transcriptional regulator, MvaT P16 subunit
|
Human Homologs
References
No references are associated with this feature.