Pseudomonas putida S16, PPS_3380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3380
Name
Replicon chromosome
Genomic location 3790853 - 3791497 (- strand)

Cross-References

RefSeq YP_004702807.1
GI 339488279
Entrez 10939010
INSDC AEJ13927.1
NCBI Locus Tag PPS_3380
UniParc UPI0002173EBF
UniProtKB Acc F8G5M8
UniProtKB ID F8G5M8_PSEP6
UniRef100 UniRef100_F8G5M8
UniRef50 UniRef50_L8ABT6
UniRef90 UniRef90_F8G5M8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.85
Kyte-Doolittle Hydrophobicity Value 1.071
Molecular Weight (kDa) 22627.9
Isoelectric Point (pI) 9.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 105 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG031457 (1 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PPS_1591) 87.8% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3380

Human Homologs

References

No references are associated with this feature.