Pseudomonas putida S16, PPS_3381

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3381
Name
Replicon chromosome
Genomic location 3792429 - 3793310 (- strand)

Cross-References

RefSeq YP_004702808.1
GI 339488280
Entrez 10939011
INSDC AEJ13928.1
NCBI Locus Tag PPS_3381
UniParc UPI0002173EC0
UniProtKB Acc F8G5M9
UniProtKB ID F8G5M9_PSEP6
UniRef100 UniRef100_F8G5M9
UniRef50 UniRef50_I7B1I3
UniRef90 UniRef90_I7B1I3

Product

Feature Type CDS
Coding Frame 1
Product Name
Integrase catalytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) 19.79
Kyte-Doolittle Hydrophobicity Value -0.612
Molecular Weight (kDa) 34566.4
Isoelectric Point (pI) 10.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 382 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019042 (78 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3381

Human Homologs

References

No references are associated with this feature.