Pseudomonas putida S16, PPS_3382

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3382
Name
Replicon chromosome
Genomic location 3793301 - 3793579 (- strand)

Cross-References

RefSeq YP_004702809.1
GI 339488281
Entrez 10939012
INSDC AEJ13929.1
NCBI Locus Tag PPS_3382
UniParc UPI0002173EC1
UniProtKB Acc F8G5N0
UniProtKB ID F8G5N0_PSEP6
UniRef100 UniRef100_F8G5N0
UniRef50 UniRef50_Q0VMR8
UniRef90 UniRef90_Q88EL8

Product

Feature Type CDS
Coding Frame 1
Product Name
IS3, transposase
Synonyms
Evidence for Translation
Charge (pH 7) 4.20
Kyte-Doolittle Hydrophobicity Value -0.952
Molecular Weight (kDa) 10783.3
Isoelectric Point (pI) 9.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 189 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000943 (931 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3382
Search term: IS3, transposase

Human Homologs

References

No references are associated with this feature.