Pseudomonas putida S16, PPS_3390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3390
Name
Replicon chromosome
Genomic location 3802399 - 3803064 (- strand)

Cross-References

RefSeq YP_004702817.1
GI 339488289
Entrez 10939020
INSDC AEJ13937.1
NCBI Locus Tag PPS_3390
UniParc UPI0002173EC9
UniProtKB Acc F8G5N8
UniProtKB ID F8G5N8_PSEP6
UniRef100 UniRef100_F8G5N8
UniRef50 UniRef50_I7IJS4
UniRef90 UniRef90_C3K7Q5

Product

Feature Type CDS
Coding Frame 1
Product Name
polysaccharide deacetylase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.12
Kyte-Doolittle Hydrophobicity Value -0.576
Molecular Weight (kDa) 26170.7
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 135 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018602 (66 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3390

Human Homologs

References

No references are associated with this feature.