Pseudomonas putida S16, PPS_3443

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3443
Name
Replicon chromosome
Genomic location 3870917 - 3872191 (+ strand)

Cross-References

RefSeq YP_004702870.1
GI 339488342
Entrez 10939073
INSDC AEJ13990.1
NCBI Locus Tag PPS_3443
UniParc UPI00021740C3
UniProtKB Acc F8G5U1
UniProtKB ID F8G5U1_PSEP6
UniRef100 UniRef100_A0A099N3W7
UniRef50 UniRef50_G8QBC2
UniRef90 UniRef90_A5W1E3

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydropyrimidine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -10.35
Kyte-Doolittle Hydrophobicity Value -0.124
Molecular Weight (kDa) 46.2
Isoelectric Point (pI) 5.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 371 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000430 (922 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3443

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
E-value: 2.6e-57
Percent Identity: 38.9

References

No references are associated with this feature.