Pseudomonas putida S16, PPS_3794

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3794
Name
Replicon chromosome
Genomic location 4280717 - 4281454 (- strand)

Cross-References

RefSeq YP_004703215.1
GI 339488687
Entrez 10939418
INSDC AEJ14335.1
NCBI Locus Tag PPS_3794
UniParc UPI0002173A8C
UniProtKB Acc F8FWH0
UniProtKB ID F8FWH0_PSEP6
UniRef100 UniRef100_F8FWH0
UniRef50 UniRef50_F8FWH0
UniRef90 UniRef90_F8FWH0

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar basal body rod protein FlgB
Synonyms
Evidence for Translation
Charge (pH 7) 7.83
Kyte-Doolittle Hydrophobicity Value -0.308
Molecular Weight (kDa) 27137.5
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 209 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001039 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3794

Human Homologs

References

No references are associated with this feature.