Pseudomonas putida S16, PPS_4150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_4150
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4701034 - 4702692 (+ strand) |
Cross-References
| RefSeq | YP_004703569.1 |
| GI | 339489041 |
| Entrez | 10939772 |
| INSDC | AEJ14689.1 |
| NCBI Locus Tag | PPS_4150 |
| UniParc | UPI0002173328 |
| UniProtKB Acc | F8G205 |
| UniProtKB ID | F8G205_PSEP6 |
| UniRef100 | UniRef100_F8G205 |
| UniRef50 | UniRef50_Q3J3R0 |
| UniRef90 | UniRef90_L0FQY8 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent DNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.61 |
| Kyte-Doolittle Hydrophobicity Value | -0.216 |
| Molecular Weight (kDa) | 61902.5 |
| Isoelectric Point (pI) | 7.79 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 257 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015267 (193 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_4150
Search term: ATP-dependent DNA ligase
|
Human Homologs
References
No references are associated with this feature.