Pseudomonas putida S16, PPS_4152

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4152
Name
Replicon chromosome
Genomic location 4704099 - 4706552 (+ strand)

Cross-References

RefSeq YP_004703571.1
GI 339489043
Entrez 10939774
INSDC AEJ14691.1
NCBI Locus Tag PPS_4152
UniParc UPI000217332A
UniProtKB Acc F8G207
UniProtKB ID F8G207_PSEP6
UniRef100 UniRef100_A0A099N352
UniRef50 UniRef50_E2XMV4
UniRef90 UniRef90_Q88NV1

Product

Feature Type CDS
Coding Frame 1
Product Name
DEAD/DEAH box helicase
Synonyms
Evidence for Translation
Charge (pH 7) 22.45
Kyte-Doolittle Hydrophobicity Value -0.103
Molecular Weight (kDa) 90.2
Isoelectric Point (pI) 10.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 386 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015266 (161 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4152

Human Homologs

Ensembl 110, assembly GRCh38.p14
activating signal cointegrator 1 complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:18697]
E-value: 2.8e-12
Percent Identity: 26.3

References

No references are associated with this feature.