Pseudomonas putida S16, PPS_4511

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4511
Name
Replicon chromosome
Genomic location 5096392 - 5097342 (+ strand)

Cross-References

RefSeq YP_004703922.1
GI 339489394
Entrez 10940125
INSDC AEJ15042.1
NCBI Locus Tag PPS_4511
UniParc UPI0002173E06
UniProtKB Acc F8G6C2
UniProtKB ID F8G6C2_PSEP6
UniRef100 UniRef100_A0A099N433
UniRef50 UniRef50_Q4KIQ0
UniRef90 UniRef90_Q88E00

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.29
Kyte-Doolittle Hydrophobicity Value 0.019
Molecular Weight (kDa) 35.4
Isoelectric Point (pI) 6.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016836 (173 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4511

Human Homologs

References

No references are associated with this feature.