Pseudomonas putida S16, PPS_4516

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4516
Name
Replicon chromosome
Genomic location 5102211 - 5105888 (- strand)

Cross-References

RefSeq YP_004703927.1
GI 339489399
Entrez 10940130
INSDC AEJ15047.1
NCBI Locus Tag PPS_4516
UniParc UPI0002173E0B
UniProtKB Acc F8G6C7
UniProtKB ID F8G6C7_PSEP6
UniRef100 UniRef100_A0A099N5Y6
UniRef50 UniRef50_F2N5E2
UniRef90 UniRef90_U2UI20

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease V subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -21.77
Kyte-Doolittle Hydrophobicity Value -0.339
Molecular Weight (kDa) 138.0
Isoelectric Point (pI) 6.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 571 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003887 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4516

Human Homologs

References

No references are associated with this feature.