Pseudomonas putida S16, PPS_4517

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4517
Name
Replicon chromosome
Genomic location 5105885 - 5109334 (- strand)

Cross-References

RefSeq YP_004703928.1
GI 339489400
Entrez 10940131
INSDC AEJ15048.1
NCBI Locus Tag PPS_4517
UniParc UPI0002173E0C
UniProtKB Acc F8G6C8
UniProtKB ID F8G6C8_PSEP6
UniRef100 UniRef100_A0A099N4C2
UniRef50 UniRef50_Q0AAI0
UniRef90 UniRef90_A5W948

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease V subunit gamma
Synonyms
Evidence for Translation
Charge (pH 7) -33.27
Kyte-Doolittle Hydrophobicity Value -0.261
Molecular Weight (kDa) 129144.3
Isoelectric Point (pI) 5.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 156 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003888 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4517

Human Homologs

References

No references are associated with this feature.