Pseudomonas putida S16, PPS_4779

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4779
Name
Replicon chromosome
Genomic location 5410062 - 5411870 (- strand)

Cross-References

RefSeq YP_004704188.1
GI 339489660
Entrez 10940391
INSDC AEJ15308.1
NCBI Locus Tag PPS_4779
UniParc UPI000217357D
UniProtKB Acc F8FU17
UniProtKB ID F8FU17_PSEP6
UniRef100 UniRef100_F8FU17
UniRef50 UniRef50_Q9HUG8
UniRef90 UniRef90_Q88D92

Product

Feature Type CDS
Coding Frame 1
Product Name
lipid A ABC exporter, fused ATPase, and inner membrane MsbA subunits
Synonyms
Evidence for Translation
Charge (pH 7) -0.92
Kyte-Doolittle Hydrophobicity Value 0.145
Molecular Weight (kDa) 66.3
Isoelectric Point (pI) 6.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004607 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4779

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 5.5e-78
Percent Identity: 33.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 5.5e-78
Percent Identity: 33.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 5.5e-78
Percent Identity: 33.6

References

No references are associated with this feature.