Pseudomonas putida S16, PPS_5026

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_5026
Name
Replicon chromosome
Genomic location 5703255 - 5704322 (- strand)

Cross-References

RefSeq YP_004704433.1
GI 339489905
Entrez 10940636
INSDC AEJ15553.1
NCBI Locus Tag PPS_5026
UniParc UPI0002173D1C
UniProtKB Acc F8FY49
UniProtKB ID F8FY49_PSEP6
UniRef100 UniRef100_A0A099N813
UniRef50 UniRef50_G8PZD9
UniRef90 UniRef90_T2HDV9

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter, MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -1.54
Kyte-Doolittle Hydrophobicity Value -0.198
Molecular Weight (kDa) 38.0
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 394 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000155 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_5026

Human Homologs

References

No references are associated with this feature.