Pseudomonas putida S16, PPS_5195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_5195
Name
Replicon chromosome
Genomic location 5889553 - 5891361 (- strand)

Cross-References

RefSeq YP_004704602.1
GI 339490074
Entrez 10940805
INSDC AEJ15722.1
NCBI Locus Tag PPS_5195
UniParc UPI0002173143
UniProtKB Acc F8G0W0
UniProtKB ID F8G0W0_PSEP6
UniRef100 UniRef100_A0A099N6E5
UniRef50 UniRef50_Q4K3G8
UniRef90 UniRef90_Q4K3G8

Product

Feature Type CDS
Coding Frame 1
Product Name
pyruvate carboxylase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -12.50
Kyte-Doolittle Hydrophobicity Value -0.078
Molecular Weight (kDa) 65.7
Isoelectric Point (pI) 5.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004985 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_5195

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 7.1e-77
Percent Identity: 31.7

References

No references are associated with this feature.