Pseudomonas putida BIRD-1, PPUBIRD1_0110 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0110
Name
trpA
Replicon chromosome
Genomic location 118382 - 119191 (- strand)

Cross-References

RefSeq YP_005928024.1
GI 386009747
EC Number 4.2.1.20
Entrez 12518341
NCBI Locus Tag PPUBIRD1_0110

Product

Feature Type CDS
Coding Frame 1
Product Name
TrpA
Synonyms
Evidence for Translation
Charge (pH 7) -6.07
Kyte-Doolittle Hydrophobicity Value 0.120
Molecular Weight (kDa) 28.4
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0110
Search term: trpA
Search term: TrpA

Human Homologs

References

No references are associated with this feature.