Pseudomonas putida BIRD-1, PPUBIRD1_0146 (znuC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0146
Name
znuC
Replicon chromosome
Genomic location 152529 - 153302 (- strand)

Cross-References

RefSeq YP_005928060.1
GI 386009783
Entrez 12518377
NCBI Locus Tag PPUBIRD1_0146

Product

Feature Type CDS
Coding Frame 1
Product Name
ZnuC
Synonyms
Evidence for Translation
Charge (pH 7) 1.93
Kyte-Doolittle Hydrophobicity Value 0.085
Molecular Weight (kDa) 27.8
Isoelectric Point (pI) 7.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005039 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0146
Search term: znuC
Search term: ZnuC

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:36]
E-value: 2.5e-15
Percent Identity: 27.7

References

No references are associated with this feature.