Pseudomonas putida BIRD-1, PPUBIRD1_0188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0188
Name
Replicon chromosome
Genomic location 197295 - 198476 (+ strand)

Cross-References

RefSeq YP_005928101.1
GI 386009824
EC Number 1.3.99.7
Entrez 12518418
NCBI Locus Tag PPUBIRD1_0188

Product

Feature Type CDS
Coding Frame 1
Product Name
Acyl-CoA dehydrogenase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.49
Kyte-Doolittle Hydrophobicity Value -0.183
Molecular Weight (kDa) 43.2
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000438 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0188

Human Homologs

Ensembl 110, assembly GRCh38.p14
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 3.0e-145
Percent Identity: 64.6
Ensembl 110, assembly GRCh38.p14
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 3.0e-145
Percent Identity: 64.6

References

No references are associated with this feature.