Pseudomonas putida BIRD-1, PPUBIRD1_0370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0370
Name
Replicon chromosome
Genomic location 427340 - 430030 (- strand)

Cross-References

RefSeq YP_005928273.1
GI 386009996
Entrez 12518600
NCBI Locus Tag PPUBIRD1_0370

Product

Feature Type CDS
Coding Frame 1
Product Name
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
Synonyms
Evidence for Translation
Charge (pH 7) -14.53
Kyte-Doolittle Hydrophobicity Value -0.349
Molecular Weight (kDa) 100815.3
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 485 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004624 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0370

Human Homologs

References

No references are associated with this feature.