Pseudomonas putida BIRD-1, PPUBIRD1_0394 (rarD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0394
Name
rarD
Replicon chromosome
Genomic location 460521 - 461408 (- strand)

Cross-References

RefSeq YP_005928294.1
GI 386010017
Entrez 12518621
NCBI Locus Tag PPUBIRD1_0394

Product

Feature Type CDS
Coding Frame 1
Product Name
protein RarD
Synonyms
Evidence for Translation
Charge (pH 7) 11.39
Kyte-Doolittle Hydrophobicity Value 0.738
Molecular Weight (kDa) 32686.6
Isoelectric Point (pI) 10.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 238 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000474 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0394
Search term: rarD
Search term: protein RarD

Human Homologs

References

No references are associated with this feature.