Pseudomonas putida BIRD-1, PPUBIRD1_0398

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0398
Name
Replicon chromosome
Genomic location 463419 - 464150 (- strand)

Cross-References

RefSeq YP_005928298.1
GI 386010021
Entrez 12518625
NCBI Locus Tag PPUBIRD1_0398

Product

Feature Type CDS
Coding Frame 1
Product Name
Competence protein ComF, putative
Synonyms
Evidence for Translation
Charge (pH 7) 16.51
Kyte-Doolittle Hydrophobicity Value -0.148
Molecular Weight (kDa) 27351.8
Isoelectric Point (pI) 9.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 472 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000478 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0398

Human Homologs

References

No references are associated with this feature.