Pseudomonas putida BIRD-1, PPUBIRD1_0403 (bioD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0403
Name
bioD
Replicon chromosome
Genomic location 468018 - 468698 (+ strand)

Cross-References

RefSeq YP_005928303.1
GI 386010026
EC Number 6.3.3.3
Entrez 12518630
NCBI Locus Tag PPUBIRD1_0403

Product

Feature Type CDS
Coding Frame 1
Product Name
BioD
Synonyms
Evidence for Translation
Charge (pH 7) -5.13
Kyte-Doolittle Hydrophobicity Value 0.296
Molecular Weight (kDa) 23.8
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000491 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0403
Search term: bioD
Search term: BioD

Human Homologs

References

No references are associated with this feature.