Pseudomonas putida BIRD-1, PPUBIRD1_0620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0620
Name
Replicon chromosome
Genomic location 698590 - 703485 (+ strand)

Cross-References

RefSeq YP_005928515.1
GI 386010238
Entrez 12518850
NCBI Locus Tag PPUBIRD1_0620

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein yfhM
Synonyms
Evidence for Translation
Charge (pH 7) -26.39
Kyte-Doolittle Hydrophobicity Value -0.300
Molecular Weight (kDa) 178239.2
Isoelectric Point (pI) 5.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 192 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015118 (156 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0620
Search term: lipoprotein yfhM

Human Homologs

References

No references are associated with this feature.