Pseudomonas putida BIRD-1, PPUBIRD1_0623

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0623
Name
Replicon chromosome
Genomic location 706455 - 708119 (+ strand)

Cross-References

RefSeq YP_005928518.1
GI 386010241
Entrez 12518853
NCBI Locus Tag PPUBIRD1_0623

Product

Feature Type CDS
Coding Frame 1
Product Name
Polypeptide-transport-associated domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.88
Kyte-Doolittle Hydrophobicity Value -0.364
Molecular Weight (kDa) 61923.0
Isoelectric Point (pI) 5.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 101 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000040 (1642 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0623

Human Homologs

References

No references are associated with this feature.