Pseudomonas putida BIRD-1, PPUBIRD1_0645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0645
Name
Replicon chromosome
Genomic location 728597 - 729514 (- strand)

Cross-References

RefSeq YP_005928540.1
GI 386010263
Entrez 12518875
NCBI Locus Tag PPUBIRD1_0645

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.28
Kyte-Doolittle Hydrophobicity Value -0.259
Molecular Weight (kDa) 34385.9
Isoelectric Point (pI) 7.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 465 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000131 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0645

Human Homologs

References

No references are associated with this feature.