Pseudomonas putida BIRD-1, PPUBIRD1_1148
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_1148
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1297455 - 1298549 (+ strand) |
Cross-References
| RefSeq | YP_005929035.1 |
| GI | 386010758 |
| Entrez | 12519382 |
| NCBI Locus Tag | PPUBIRD1_1148 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.92 |
| Kyte-Doolittle Hydrophobicity Value | 0.218 |
| Molecular Weight (kDa) | 38.2 |
| Isoelectric Point (pI) | 4.78 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002161 (551 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_1148
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
E-value:
3.0e-67
Percent Identity:
49.4
|
References
No references are associated with this feature.