Pseudomonas putida BIRD-1, PPUBIRD1_2006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2006
Name
Replicon chromosome
Genomic location 2260223 - 2260804 (- strand)

Cross-References

RefSeq YP_005929859.1
GI 386011582
Entrez 12520223
NCBI Locus Tag PPUBIRD1_2006

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.44
Kyte-Doolittle Hydrophobicity Value -0.101
Molecular Weight (kDa) 21.5
Isoelectric Point (pI) 6.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016486 (117 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2006

Human Homologs

References

No references are associated with this feature.