Pseudomonas putida BIRD-1, PPUBIRD1_2008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2008
Name
Replicon chromosome
Genomic location 2261679 - 2262863 (- strand)

Cross-References

RefSeq YP_005929861.1
GI 386011584
EC Number 2.3.1.9
Entrez 12520225
NCBI Locus Tag PPUBIRD1_2008

Product

Feature Type CDS
Coding Frame 1
Product Name
Beta-ketothiolase
Synonyms
Evidence for Translation
Charge (pH 7) -0.16
Kyte-Doolittle Hydrophobicity Value 0.109
Molecular Weight (kDa) 40.9
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 473 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016485 (101 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2008
Search term: Beta-ketothiolase

Human Homologs

Ensembl 97, assembly GRCh38.p12
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 1.0e-93
Percent Identity: 45.4
Ensembl 97, assembly GRCh38.p12
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 1.0e-93
Percent Identity: 45.4

References

No references are associated with this feature.