Pseudomonas putida BIRD-1, PPUBIRD1_2136

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2136
Name
Replicon chromosome
Genomic location 2429673 - 2430236 (- strand)

Cross-References

RefSeq YP_005929980.1
GI 386011703
EC Number 3.6.1.13
EC Number 3.6.1.18
Entrez 12520344
NCBI Locus Tag PPUBIRD1_2136

Product

Feature Type CDS
Coding Frame 1
Product Name
NUDIX hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -4.99
Kyte-Doolittle Hydrophobicity Value -0.283
Molecular Weight (kDa) 21.3
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016427 (120 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2136
Search term: NUDIX hydrolase

Human Homologs

Ensembl 110, assembly GRCh38.p14
nudix hydrolase 12 [Source:HGNC Symbol;Acc:HGNC:18826]
E-value: 5.0e-05
Percent Identity: 35.6
Ensembl 110, assembly GRCh38.p14
nudix hydrolase 12 [Source:HGNC Symbol;Acc:HGNC:18826]
E-value: 5.0e-05
Percent Identity: 35.6

References

No references are associated with this feature.