Pseudomonas putida BIRD-1, PPUBIRD1_2138

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2138
Name
Replicon chromosome
Genomic location 2431080 - 2431469 (- strand)

Cross-References

RefSeq YP_005929982.1
GI 386011705
EC Number 4.1.1.44
Entrez 12520346
NCBI Locus Tag PPUBIRD1_2138

Product

Feature Type CDS
Coding Frame 1
Product Name
Carboxymuconolactone decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) 0.65
Kyte-Doolittle Hydrophobicity Value -0.408
Molecular Weight (kDa) 14.7
Isoelectric Point (pI) 7.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 246 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000231 (995 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2138

Human Homologs

References

No references are associated with this feature.