Pseudomonas putida BIRD-1, PPUBIRD1_2145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2145
Name
Replicon chromosome
Genomic location 2437318 - 2438724 (+ strand)

Cross-References

RefSeq YP_005929989.1
GI 386011712
Entrez 12520353
NCBI Locus Tag PPUBIRD1_2145

Product

Feature Type CDS
Coding Frame 1
Product Name
Permease for cytosine/purine, uracil, thiamine, allantoin
Synonyms
Evidence for Translation
Charge (pH 7) 4.23
Kyte-Doolittle Hydrophobicity Value 0.819
Molecular Weight (kDa) 50.4
Isoelectric Point (pI) 8.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 108 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016420 (74 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2145

Human Homologs

References

No references are associated with this feature.