Pseudomonas putida BIRD-1, PPUBIRD1_2149

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2149
Name
Replicon chromosome
Genomic location 2442616 - 2443527 (- strand)

Cross-References

RefSeq YP_005929993.1
GI 386011716
Entrez 12520357
NCBI Locus Tag PPUBIRD1_2149

Product

Feature Type CDS
Coding Frame 1
Product Name
Helix-turn-helix domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.54
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 32.9
Isoelectric Point (pI) 6.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000548 (773 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2149

Human Homologs

References

No references are associated with this feature.