Pseudomonas putida BIRD-1, PPUBIRD1_2461
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_2461
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2804790 - 2806103 (- strand) |
Cross-References
| RefSeq | YP_005930294.1 |
| GI | 386012017 |
| EC Number | 2.3.1.179 |
| Entrez | 12520658 |
| NCBI Locus Tag | PPUBIRD1_2461 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
3-oxoacyl-(acyl-carrier-protein) synthase II, putative
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.94 |
| Kyte-Doolittle Hydrophobicity Value | 0.136 |
| Molecular Weight (kDa) | 44999.6 |
| Isoelectric Point (pI) | 5.64 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 572 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001303 (401 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2461
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
3-oxoacyl-ACP synthase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26063]
E-value:
4.3e-84
Percent Identity:
43.1
|
References
No references are associated with this feature.