Pseudomonas putida BIRD-1, PPUBIRD1_2538
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_2538
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2880256 - 2880417 (+ strand) |
Cross-References
| RefSeq | YP_005930368.1 |
| GI | 386012091 |
| Entrez | 12520732 |
| NCBI Locus Tag | PPUBIRD1_2538 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Transcriptional regulator PyrR, putative
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.136 |
| Molecular Weight (kDa) | 5849.7 |
| Isoelectric Point (pI) | 6.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Nonpathogenic
Found only in nonpathogenic strains
Hits to this gene were found in one genus
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016176 (34 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2538
Search term: Transcriptional regulator PyrR, putative
|
Human Homologs
References
No references are associated with this feature.