Pseudomonas putida BIRD-1, PPUBIRD1_2903

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2903
Name
Replicon chromosome
Genomic location 3262102 - 3263415 (+ strand)

Cross-References

RefSeq YP_005930720.1
GI 386012443
Entrez 12521084
NCBI Locus Tag PPUBIRD1_2903

Product

Feature Type CDS
Coding Frame 1
Product Name
mandelate racemase/muconate lactonizing protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.84
Kyte-Doolittle Hydrophobicity Value -0.092
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 5.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 265 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015942 (37 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2903

Human Homologs

Ensembl 110, assembly GRCh38.p14
enolase superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:30365]
E-value: 1.8e-159
Percent Identity: 61.0

References

No references are associated with this feature.