Pseudomonas putida BIRD-1, PPUBIRD1_2912

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2912
Name
Replicon chromosome
Genomic location 3272216 - 3272599 (+ strand)

Cross-References

RefSeq YP_005930729.1
GI 386012452
Entrez 12521093
NCBI Locus Tag PPUBIRD1_2912

Product

Feature Type CDS
Coding Frame 1
Product Name
MerR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.11
Kyte-Doolittle Hydrophobicity Value -0.497
Molecular Weight (kDa) 14.7
Isoelectric Point (pI) 6.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 364 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015931 (80 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2912

Human Homologs

References

No references are associated with this feature.