Pseudomonas putida BIRD-1, PPUBIRD1_3368

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_3368
Name
Replicon chromosome
Genomic location 3764612 - 3765298 (+ strand)

Cross-References

RefSeq YP_005931168.1
GI 386012891
Entrez 12521536
NCBI Locus Tag PPUBIRD1_3368

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.58
Kyte-Doolittle Hydrophobicity Value -0.139
Molecular Weight (kDa) 24.6
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002712 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3368

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 8.5e-15
Percent Identity: 32.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 8.5e-15
Percent Identity: 32.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 8.5e-15
Percent Identity: 32.5

References

No references are associated with this feature.